The SAC Class#
SAC (Seismic Analysis Code)
is a commonly used program that uses its own file format. Pysmo provides a Python class
(SacIO
) to access data stored in these SAC files. The way
SAC names things is different from how the equivalent types are named in pysmo (e.g. the
seismogram begin_time
is b
in SAC). As the attributes in the SacIO
class are named
accordingly, it too is not compatible with pysmo types. However, all is not lost: in order
to make use of the SacIO
class, we simply need to map the SacIO
attributes to the names
used in pysmo. This mapping happens in a new class, called SAC
,
which provides access to all the SacIO
attributes and pysmo compatible attributes.
This means there is little reason to ever use the SacIO
class directly, and you are
encouraged to always use the SAC
class instead when working with SAC files.
SAC
#
Bases: SacIO
Class for accessing data in SAC files.
Tip
This class inherits the numerous attributes and methods from the SacIO class. This gives access to all SAC headers, ability to load from a file, download data, and so on.
Examples:
The SAC
class provides a data structure that mirrors header fields and
data as presented by the sac fileformat. SAC instances are typically
created by reading sac file. Data and header fields can be accessed as
attributes:
>>> from pysmo import SAC
>>> my_sac = SAC.from_file('testfile.sac')
>>> print(my_sac.delta)
0.019999999552965164
>>> print(my_sac.data)
array([2302., 2313., 2345., ..., 2836., 2772., 2723.])
>>> my_sac.evla = 23.14
Presenting the data in this way is not compatible with pysmo types.
For example, event coordinates are stored in the evla
and evlo
attributes, which do not match the pysmo Location
type. Renaming or aliasing evla
to latitude
and evlo
to longitude
would solve the problem for the event coordinates, but since the SAC format
also specifies station coordinates (stla
, stlo
) we still would run
into compatibility issues.
In order to map these incompatible attributes to ones that can be used with pysmo types, we use helper classes as a way to access the attributes under different names that are compatible with pysmo types:
>>> # Import the Seismogram type to check if the nested class is compatible.
>>> from pysmo import Seismogram
>>>
>>> # First verify that a SAC instance is not a pysmo Seismogram:
>>> isinstance(my_sac, Seismogram)
False
>>> # The my_sac.seismogram object is, however:
>>> isinstance(my_sac.seismogram, Seismogram)
True
Note that my_sac.seismogram
is an instance of the
SacSeismogram
helper class. It is
created when a new SAC
instance is instantiated. For convenience we can
access it via a new variable:
>>> my_seismogram = my_sac.seismogram
>>> isinstance(my_seismogram, Seismogram)
True
>>> # Verify the helper object is indeed just providing access to the same thing
>>> # under a different name:
>>> my_sac.delta is my_seismogram.delta
True
Because the SAC file format defines a large amount of header fields for
metadata, it needs to allow for many of these to be optional. Since the helper
classes are more specific (and intended to be used with pysmo types), their
attributes typically may not be None
:
>>> my_sac.evla = None
>>> # No error: a SAC file doesn't have to contain event information.
>>> my_sac.event.latitude = None
TypeError: SacEvent.latitude may not be of None type.
>>> # Error: the my_sac.event object may not have attributes set to `None`.
Attributes:
Name | Type | Description |
---|---|---|
seismogram |
SacSeismogram
|
Maps pysmo compatible attributes to the internal SAC attributes. |
station |
SacStation
|
Maps pysmo compatible attributes to the internal SAC attributes. |
event |
SacEvent
|
Maps pysmo compatible attributes to the internal SAC attributes. |
Source code in pysmo/classes/sac.py
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|
SacEvent
#
Bases: _SacNested
Helper class for event attributes.
The SacEvent
class is used to map SAC attributes in a way that
matches pysmo types. An instance of this class is created for each
new (parent) SAC instance to enable pysmo
types compatibility.
Note
Not all SAC files contain event information.
Attributes:
Name | Type | Description |
---|---|---|
latitude |
float
|
Event Latitude. |
longitude |
float
|
Event Longitude. |
depth |
float
|
Event depth in meters. |
time |
datetime
|
Event origin time (UTC). |
Source code in pysmo/classes/sac.py
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|
SacSeismogram
#
Bases: _SacNested
Helper class for seismogram attributes.
The SacSeismogram
class is used to map SAC attributes in a way that
matches pysmo types. An instance of this class is created for each new
(parent) SACinstance to enable pysmo types
compatibility.
Attributes:
Name | Type | Description |
---|---|---|
begin_time |
datetime
|
Seismogram begin timedate. |
end_time |
datetime
|
Seismogram end time. |
delta |
float
|
Seismogram sampling interval. |
data |
ndarray
|
Seismogram data. |
Note
Timing operations in a SAC file use a reference time, and all times (begin
time, event origin time, picks, etc.) are relative to this reference time.
Here, the begin_time
is the actual time (in UTC) of the first data point.
As other time fields in the SAC specification depend on the reference time,
changing the begin_time
will adjust only the b
attribute in the parent
SAC
instance.
Source code in pysmo/classes/sac.py
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|
SacStation
#
Bases: _SacNested
Helper class for SAC event attributes.
The SacStation
class is used to map SAC attributes in a way that
matches pysmo types. An instance of this class is created for each
new (parent) SACinstance to enable pysmo
types compatibility.
Attributes:
Name | Type | Description |
---|---|---|
name |
str
|
Station name or code. |
network |
str | None
|
Network name or code. |
latitude |
float
|
Station latitude. |
longitude |
float
|
Station longitude. |
elevation |
float | None
|
Station elevation in meters. |
Source code in pysmo/classes/sac.py
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|
SacIO
#
The SacIO
class reads and writes data and header values to and from a
SAC file. Instances of SacIO
provide attributes named identially to
header names in the SAC file format. Additonal attributes may be set, but are
not written to a SAC file (because there is no space reserved for them there).
Class attributes with corresponding header fields in a SAC file (for example the
begin time b
) are checked for a valid format before being saved in the
SacIO
instance.
Warning
This class should typically never be used directly. Instead please use the SAC class, which inherits all attributes and methods from here.
Examples:
Create a new instance from a file and print seismogram data:
>>> from pysmo.lib.io import SacIO
>>> my_sac = SacIO.from_file('testfile.sac')
>>> data = my_sac.data
>>> data
array([-1616.0, -1609.0, -1568.0, -1606.0, -1615.0, -1565.0, ...
Read the sampling rate:
>>> delta = my_sac.delta
>>> delta
0.019999999552965164
Change the sampling rate:
>>> newdelta = 0.05
>>> my_sac.delta = newdelta
>>> my_sac.delta
0.05
Create a new instance from IRIS services:
>>> from pysmo.lib.io import SacIO
>>> my_sac = SacIO.from_iris(
>>> net="C1",
>>> sta="VA01",
>>> cha="BHZ",
>>> loc="--",
>>> start="2021-03-22T13:00:00",
>>> duration=1 * 60 * 60,
>>> scale="AUTO",
>>> demean="true",
>>> force_single_result=True)
>>> my_sac.npts
144001
For each SAC(file) header field there is a corresponding attribute in this class.
There are a lot of header fields in a SAC file, which are all called the
same way when using SAC
.
Attributes:
Name | Type | Description |
---|---|---|
delta |
float
|
Increment between evenly spaced samples (nominal value). |
depmin |
float | None
|
Minimum value of dependent variable. |
depmax |
float | None
|
Maximum value of dependent variable. |
odelta |
float | None
|
Observed increment if different from nominal value. |
b |
float
|
Beginning value of the independent variable. |
e |
float
|
Ending value of the independent variable. |
o |
float | None
|
Event origin time (seconds relative to reference time). |
a |
float | None
|
First arrival time (seconds relative to reference time). |
t0 |
float | None
|
User defined time pick or marker 0 (seconds relative to reference time). |
t1 |
float | None
|
User defined time pick or marker 1 (seconds relative to reference time). |
t2 |
float | None
|
User defined time pick or marker 2 (seconds relative to reference time). |
t3 |
float | None
|
User defined time pick or marker 3 (seconds relative to reference time). |
t4 |
float | None
|
User defined time pick or marker 4 (seconds relative to reference time). |
t5 |
float | None
|
User defined time pick or marker 5 (seconds relative to reference time). |
t6 |
float | None
|
User defined time pick or marker 6 (seconds relative to reference time). |
t7 |
float | None
|
User defined time pick or marker 7 (seconds relative to reference time). |
t8 |
float | None
|
User defined time pick or marker 8 (seconds relative to reference time). |
t9 |
float | None
|
User defined time pick or marker 9 (seconds relative to reference time). |
f |
float | None
|
Fini or end of event time (seconds relative to reference time). |
resp0 |
float | None
|
Instrument response parameter 0 (not currently used). |
resp1 |
float | None
|
Instrument response parameter 1 (not currently used). |
resp2 |
float | None
|
Instrument response parameter 2 (not currently used). |
resp3 |
float | None
|
Instrument response parameter 3 (not currently used). |
resp4 |
float | None
|
Instrument response parameter 4 (not currently used). |
resp5 |
float | None
|
Instrument response parameter 5 (not currently used). |
resp6 |
float | None
|
Instrument response parameter 6 (not currently used). |
resp7 |
float | None
|
Instrument response parameter 7 (not currently used). |
resp8 |
float | None
|
Instrument response parameter 8 (not currently used). |
resp9 |
float | None
|
Instrument response parameter 9 (not currently used). |
stla |
float | None
|
Station latitude (degrees, north positive). |
stlo |
float | None
|
Station longitude (degrees, east positive). |
stel |
float | None
|
Station elevation above sea level (meters). |
stdp |
float | None
|
Station depth below surface (meters). |
evla |
float | None
|
Event latitude (degrees, north positive). |
evlo |
float | None
|
Event longitude (degrees, east positive). |
evel |
float | None
|
Event elevation (meters). |
evdp |
float | None
|
Event depth below surface (kilometers -- previously meters). |
mag |
float | None
|
Event magnitude. |
user0 |
float | None
|
User defined variable storage area. |
user1 |
float | None
|
User defined variable storage area. |
user2 |
float | None
|
User defined variable storage area. |
user3 |
float | None
|
User defined variable storage area. |
user4 |
float | None
|
User defined variable storage area. |
user5 |
float | None
|
User defined variable storage area. |
user6 |
float | None
|
User defined variable storage area. |
user7 |
float | None
|
User defined variable storage area. |
user8 |
float | None
|
User defined variable storage area. |
user9 |
float | None
|
User defined variable storage area. |
dist |
float
|
Station to event distance (km). |
az |
float
|
Event to station azimuth (degrees). |
baz |
float
|
Station to event azimuth (degrees). |
gcarc |
float
|
Station to event great circle arc length (degrees). |
depmen |
float | None
|
Mean value of dependent variable. |
cmpaz |
float | None
|
Component azimuth (degrees clockwise from north). |
cmpinc |
float | None
|
Component incident angle (degrees from upward vertical; SEED/MINISEED uses dip: degrees from horizontal down). |
xminimum |
float | None
|
Minimum value of X (Spectral files only). |
xmaximum |
float | None
|
Maximum value of X (Spectral files only). |
yminimum |
float | None
|
Minimum value of Y (Spectral files only). |
ymaximum |
float | None
|
Maximum value of Y (Spectral files only). |
nzyear |
int | None
|
GMT year corresponding to reference (zero) time in file. |
nzjday |
int | None
|
GMT julian day. |
nzhour |
int | None
|
GMT hour. |
nzmin |
int | None
|
GMT minute. |
nzsec |
int | None
|
GMT second. |
nzmsec |
int | None
|
GMT millisecond. |
nvhdr |
int
|
Header version number. |
norid |
int | None
|
Origin ID (CSS 3.0). |
nevid |
int | None
|
Event ID (CSS 3.0). |
npts |
int
|
Number of points per data component. |
nwfid |
int | None
|
Waveform ID (CSS 3.0). |
nxsize |
float | None
|
Spectral Length (Spectral files only). |
nysize |
float | None
|
Spectral Length (Spectral files only). |
iftype |
str
|
Type of file. |
idep |
str
|
Type of dependent variable. |
iztype |
str
|
Reference time equivalence. |
iinst |
str | None
|
Type of recording instrument. |
istreg |
str | None
|
Station geographic region. |
ievreg |
str | None
|
Event geographic region. |
ievtyp |
str
|
Type of event. |
iqual |
str | None
|
Quality of data. |
isynth |
str | None
|
Synthetic data flag. |
imagtyp |
str | None
|
Magnitude type. |
imagsrc |
str | None
|
Source of magnitude information. |
ibody |
str | None
|
Body / Spheroid definition used in Distance Calculations. |
leven |
bool
|
TRUE if data is evenly spaced. |
lpspol |
bool | None
|
TRUE if station components have a positive polarity (left-hand rule). |
lovrok |
bool | None
|
TRUE if it is okay to overwrite this file on disk. |
lcalda |
bool
|
TRUE if DIST, AZ, BAZ, and GCARC are to be calculated from station and event coordinates. |
kstnm |
str | None
|
Station name. |
kevnm |
str | None
|
Event name. |
khole |
str | None
|
Nuclear: hole identifier; Other: location identifier (LOCID). |
ko |
str | None
|
Event origin time identification. |
ka |
str | None
|
First arrival time identification. |
kt0 |
str | None
|
User defined time pick identification. |
kt1 |
str | None
|
User defined time pick identification. |
kt2 |
str | None
|
User defined time pick identification. |
kt3 |
str | None
|
User defined time pick identification. |
kt4 |
str | None
|
User defined time pick identification. |
kt5 |
str | None
|
User defined time pick identification. |
kt6 |
str | None
|
User defined time pick identification. |
kt7 |
str | None
|
User defined time pick identification. |
kt8 |
str | None
|
User defined time pick identification. |
kt9 |
str | None
|
User defined time pick identification. |
kf |
str | None
|
Fini identification. |
kuser0 |
str | None
|
User defined variable storage area. |
kuser1 |
str | None
|
User defined variable storage area. |
kuser2 |
str | None
|
User defined variable storage area. |
kcmpnm |
str | None
|
Channel name. SEED volumes use three character names, and the third is the component/orientation. For horizontals, the current trend is to use 1 and 2 instead of N and E. |
knetwk |
str | None
|
Name of seismic network. |
kdatrd |
str | None
|
Date data was read onto computer. |
kinst |
str | None
|
Generic name of recording instrument. |
Source code in pysmo/lib/io/sacio.py
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|
kzdate: str | None
property
#
Returns:
Type | Description |
---|---|
str | None
|
ISO 8601 format of GMT reference date. |
kztime: str | None
property
#
Returns:
Type | Description |
---|---|
str | None
|
Alphanumeric form of GMT reference time. |
from_buffer(buffer)
classmethod
#
Create a new SAC instance from a SAC data buffer.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
buffer |
bytes
|
Buffer containing SAC file content. |
required |
Returns:
Type | Description |
---|---|
Self
|
A new SacIO instance. |
Source code in pysmo/lib/io/sacio.py
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|
from_file(filename)
classmethod
#
Create a new SAC instance from a SAC file.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
filename |
str
|
Name of the SAC file to read. |
required |
Returns:
Type | Description |
---|---|
Self
|
A new SacIO instance. |
Source code in pysmo/lib/io/sacio.py
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|
from_iris(net, sta, cha, loc, force_single_result=False, **kwargs)
classmethod
#
Create a list of SAC instances from a single IRIS request using the output format as "sac.zip".
Parameters:
Name | Type | Description | Default |
---|---|---|---|
force_single_result |
bool
|
If true, the function will return a single SAC object or None if the requests returns nothing. |
False
|
Returns:
Type | Description |
---|---|
Self | dict[str, Self] | None
|
A new SacIO instance. |
Source code in pysmo/lib/io/sacio.py
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read(filename)
#
Read data and headers from a SAC file into an existing SAC instance.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
filename |
str
|
Name of the sac file to read. |
required |
Source code in pysmo/lib/io/sacio.py
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|
read_buffer(buffer)
#
Read data and headers from a SAC byte buffer into an existing SAC instance.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
buffer |
bytes
|
Buffer containing SAC file content. |
required |
Source code in pysmo/lib/io/sacio.py
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write(filename)
#
Writes data and header values to a SAC file.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
filename |
str
|
Name of the sacfile to write to. |
required |
Source code in pysmo/lib/io/sacio.py
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